The detailed information of tRNA gene sequence


Sequence ID>ENV08002349
Genome IDABPS01001811
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 04; altitude 310m AMSL; sample depth 1m below water level, 3-4mm depth into the mat
Species
Start position on genome 713
End posion on genome 637
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
ggtcgatccc
tRNA gene sequence 
GCGCCCGTAGCTCAGTTGGATAGAGCGCCGGACTACGAATCCGTAGGTCGCAGGTTCGAA
TCCTGCCGGGCGCGCCA
Downstream region at tRNA end position 
ccgcggtccc
Secondary structure (Cloverleaf model)
>ENV08002349	Arg	ACG
                   c      GCCA ccgcggtccc
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGTC
                    C   T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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