The detailed information of tRNA gene sequence


Sequence ID>ENV08002351
Genome IDABPS01002218
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 04; altitude 310m AMSL; sample depth 1m below water level, 3-4mm depth into the mat
Species
Start position on genome 646
End posion on genome 562
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
agaatttaaa
tRNA gene sequence 
GGTGGGGTTCCCGAGTGGTCAAAGGGAACAGACTGTAAATCTGTCGGCGACGCCTTCGGA
GGTTCAAATCCTCCCCCCACCATCA
Downstream region at tRNA end position 
tatttttaag
Secondary structure (Cloverleaf model)
>ENV08002351	Tyr	GTA
                   a      ATCA tatttttaag
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C T C C     A
      T G A        T      | | | | |     A
    G       G C C C       G G A G G     C
    G         | | |                 T T
    T       A G G G
      C A A        A     CGGCGACGCCTTC
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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