The detailed information of tRNA gene sequence


Sequence ID>ENV08002373
Genome IDABPS01008659
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 04; altitude 310m AMSL; sample depth 1m below water level, 3-4mm depth into the mat
Species
Start position on genome 587
End posion on genome 658
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
cagtcttccc
tRNA gene sequence 
GCGGGCGTAGCTCAGTGGTAGAGCGTCACGTTGCCAACGTGAATGTCGTGAGTTCGAATC
TCATCGCCCGCTtag
Downstream region at tRNA end position 
gtaaaaaggt
Secondary structure (Cloverleaf model)
>ENV08002373	Gly	GCC
                   c      Ttag gtaaaaaggt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T A C T C     A
        G A        A      + | | | |     G
      T     C T C G       G T G A G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     ATGTC
                    T - A
                    C - G
                    A - T
                    C - G
                    G - C
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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