The detailed information of tRNA gene sequence


Sequence ID>ENV08002374
Genome IDABPS01008660
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 04; altitude 310m AMSL; sample depth 1m below water level, 3-4mm depth into the mat
Species
Start position on genome 659
End posion on genome 588
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
cagtcttccc
tRNA gene sequence 
GCGGGCGTAGCTCAGTGGTAGAGCGTCACGTTGCCAACGTGAATGTCGTGAGTTCGAATC
TCATCGCCCGCTtag
Downstream region at tRNA end position 
gtaaaaaggt
Secondary structure (Cloverleaf model)
>ENV08002374	Gly	GCC
                   c      Ttag gtaaaaaggt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T A C T C     A
        G A        A      + | | | |     G
      T     C T C G       G T G A G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     ATGTC
                    T - A
                    C - G
                    A - T
                    C - G
                    G - C
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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