The detailed information of tRNA gene sequence


Sequence ID>ENV08002426
Genome IDABPU01000184
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 06; altitude 310m AMSL; sample depth 1m below water level, 5-6mm depth into the mat
Species
Start position on genome 417
End posion on genome 494
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tgtgagtctc
tRNA gene sequence 
GGGCCTGTAGCTCAGTTCGGTCAGAGCGCACGCCTGATAAGCGTGAGGTCGATGGTTCAA
TTCCATCCAGGCCCACCA
Downstream region at tRNA end position 
atggtcaaat
Secondary structure (Cloverleaf model)
>ENV08002426	Ile	GAT
                   c      ACCA atggtcaaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T T
                    T     C T A C C     A
    T T G A        A      | | | | |     A
  C         C T C G       G A T G G     C
  G         | | | |                 T T
  G         G A G C
    T C A          G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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