The detailed information of tRNA gene sequence


Sequence ID>ENV08002432
Genome IDABPU01001665
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 06; altitude 310m AMSL; sample depth 1m below water level, 5-6mm depth into the mat
Species
Start position on genome 363
End posion on genome 439
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gcaatttatt
tRNA gene sequence 
GGGGCATTAGCTCAGTTGGCTAGAGCGTTTGACTGGCAGTCAAGAGGTCATCGGTTCGAC
TCCGATATGCTCCACCT
Downstream region at tRNA end position 
ccgcccgccg
Secondary structure (Cloverleaf model)
>ENV08002432	Ala	GGC
                   t      ACCT ccgcccgccg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     A - T
                     T - A          T C
                    T     T A G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    T + G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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