The detailed information of tRNA gene sequence


Sequence ID>ENV08002446
Genome IDABPU01006479
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 06; altitude 310m AMSL; sample depth 1m below water level, 5-6mm depth into the mat
Species
Start position on genome 360
End posion on genome 434
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
attattttat
tRNA gene sequence 
GGCCCATTGGTCAAGCGGTTAAGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGATTC
CCCTATGGGTCACCA
Downstream region at tRNA end position 
ttttttacat
Secondary structure (Cloverleaf model)
>ENV08002446	Glu	TTC
                   t      ACCA ttttttacat
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T T
                    T     T C C C C     A
      C G A        G      | | | | |     G
    G       A C T G       A G G G G     C
    G         | | |                 T T
    T       A G A C
      T A          A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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