The detailed information of tRNA gene sequence


Sequence ID>ENV08002471
Genome IDABPV01000472
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 07; altitude 310m AMSL; sample depth 1m below water level, 6-10mm depth into the mat
Species
Start position on genome 557
End posion on genome 633
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cgcccgttct
tRNA gene sequence 
GGGTCGGTAGCTCAGGTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGAGGTTCAAG
TCCTCCTCGACCCACCA
Downstream region at tRNA end position 
tactcccacg
Secondary structure (Cloverleaf model)
>ENV08002471	Ile	GAT
                   t      ACCA tactcccacg
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     G + T          T G
                    T     C C T C C     A
      G G A        A      | | | | |     A
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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