The detailed information of tRNA gene sequence


Sequence ID>ENV08002528
Genome IDABPW01009867
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 08; altitude 310m AMSL; sample depth 1m below water level, 10-22mm depth into the mat
Species
Start position on genome 230
End posion on genome 306
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
ctaattataa
tRNA gene sequence 
GGACTCGTAGCATAACTGGATAGTGCACCTGACTACGGATCAGGAGGTTGGGGGTTCGAA
TCCCTCCGAGTTCACAA
Downstream region at tRNA end position 
aatgccggca
Secondary structure (Cloverleaf model)
>ENV08002528	Arg	ACG
                   a      ACAA aatgccggca
                     G - C
                     G + T
                     A - T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C A A        A      | + | | |     G
    T       T A C G       G G G G G     C
    G       + | | |                 T T
    G       G T G C
      A T A        A     AGGTT
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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