The detailed information of tRNA gene sequence


Sequence ID>ENV08002540
Genome IDABPX01000140
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 09; altitude 310m AMSL; sample depth 1m below water level, 22-34mm depth into the mat
Species
Start position on genome 817
End posion on genome 745
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ntttaaatat
tRNA gene sequence 
GGCCCGGTCGTCTAGTGGCTAGGACGCCAGGTTTTCATCCTGGTAACCGGAGTTCGATTC
TCCGTCGGGCTACtt
Downstream region at tRNA end position 
aacataatta
Secondary structure (Cloverleaf model)
>ENV08002540	Glu	TTC
                   t      ACtt aacataatta
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G + T          T T
                    T     G C C T C     A
      T G A        C      | | | | |     G
    G       T C T G       C G G A G     C
    G       + | | |                 T T
    C       G G A C
      T A          G     TAAC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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