The detailed information of tRNA gene sequence


Sequence ID>ENV08002552
Genome IDABPX01002939
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 09; altitude 310m AMSL; sample depth 1m below water level, 22-34mm depth into the mat
Species
Start position on genome 317
End posion on genome 403
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
agacgacttc
tRNA gene sequence 
GCCGGGGTGGTGAAACTGGTAGACGCAGAGGACTCAAAATCCTCCGGGCGCAAGCCCATG
CGGGTTCGATTCCCGCCCCCGGCACCA
Downstream region at tRNA end position 
cttaaaaatc
Secondary structure (Cloverleaf model)
>ENV08002552	Leu	CAA
                   c      ACCA cttaaaaatc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T T
                    T     C G C C C     A
      C A A        G      | | | | |     G
    T       A G T G       G C G G G     C
    G         | + |                 T T
    G       A C G C
      T A G        A     CGGGCGCAAGCCCAT
                    G - C
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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