The detailed information of tRNA gene sequence


Sequence ID>ENV08002557
Genome IDABPX01004499
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 09; altitude 310m AMSL; sample depth 1m below water level, 22-34mm depth into the mat
Species
Start position on genome 479
End posion on genome 404
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
tttacttcac
tRNA gene sequence 
GCCGAGGTAGCTCAGTCGGTAGAGCAGGGGACTGAAAATCCCCGTGTCGGCAGTTCAATT
CTGTCCCTCGGCACCA
Downstream region at tRNA end position 
gacacatcag
Secondary structure (Cloverleaf model)
>ENV08002557	Phe	GAA
                   c      ACCA gacacatcag
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T T
                    T     C T G T C     A
      T G A        A      | + | | |     A
    C       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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