The detailed information of tRNA gene sequence


Sequence ID>ENV08002563
Genome IDABPX01006196
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 09; altitude 310m AMSL; sample depth 1m below water level, 22-34mm depth into the mat
Species
Start position on genome 415
End posion on genome 342
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
ggtggagatc
tRNA gene sequence 
GCGGGTGTAGCTCAATGGTAGAGCAGCAGCTTCCCAAGCTGACGACGAGGGTTCGATTCC
CTTCACCCGCTCCA
Downstream region at tRNA end position 
tggccggccc
Secondary structure (Cloverleaf model)
>ENV08002563	Gly	CCC
                   c      TCCA tggccggccc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T T C C C     A
        A A        A      + | | | |     G
      T     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     CGAC
                    G   A
                    C - G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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