The detailed information of tRNA gene sequence


Sequence ID>ENV08002601
Genome IDABPY01006726
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 10; altitude 310m AMSL; sample depth 1m below water level, 34-49mm depth into the mat
Species
Start position on genome 531
End posion on genome 603
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
tcgcaaataa
tRNA gene sequence 
GCGGGAATAACTCAGTGGTAGAGTGCAACCTTGCCAAGGTTGACGTCGCGGGTTCGAATC
CCGTTTCCCGCTCat
Downstream region at tRNA end position 
attccattaa
Secondary structure (Cloverleaf model)
>ENV08002601	Gly	GCC
                   a      TCat attccattaa
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     T G C C C     A
        G A        A      + | | | |     G
      T     C T C A       G C G G G     C
      G     | | | |                 T T
      G     G A G T
        T A        G     ACGTC
                    C - G
                    A - T
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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