The detailed information of tRNA gene sequence


Sequence ID>ENV08002611
Genome IDABPY01011502
Search identical group
Phylum/Classmicrobial mat metagenome; Guerrero Negro Hypersaline Mat 10; altitude 310m AMSL; sample depth 1m below water level, 34-49mm depth into the mat
Species
Start position on genome 751
End posion on genome 675
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cccgaaatgc
tRNA gene sequence 
GCGGGTGTAGCTCAGTTGGTTAGAGTACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
CCCCGTCACTCGCGCCA
Downstream region at tRNA end position 
tttccttcat
Secondary structure (Cloverleaf model)
>ENV08002611	Asp	GTC
                   c      GCCA tttccttcat
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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