The detailed information of tRNA gene sequence


Sequence ID>WENV170111029
Genome IDCECF01056350
Search identical group
Phylum/Class[CECF] gut metagenome; human stools
Species
Start position on genome 1268
End posion on genome 1177
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGAAAGATGGCTGAGTTGGTCTAAGGCGCACGACTGGAAATCGTGTAACGTGTCAAAAGC
GTTCTGGGGTTCGAATCCCCATCTTTCCGCCA
Downstream region at tRNA end position 
gaaacctgaa
Secondary structure (Cloverleaf model)
>WENV170111029	Ser	GGA
                   n      GCCA gaaacctgaa
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     A - T          T A
                    T     A C C C C     A
    T T G A        G      | | | | |     G
  G         G T C G       T G G G G     C
  G           + | |                 T T
  T         A G G C
    C T A          G     TAACGTGTCAAAAGCGTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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