The detailed information of tRNA gene sequence


Sequence ID>WENV170112133
Genome IDCEGD01001712
Search identical group
Phylum/Class[CEGD] microbial mat metagenome; grass silage
Species
Start position on genome 3954
End posion on genome 3864
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caataaactt
tRNA gene sequence 
AGAGAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTATGCTCCAAAAGGGC
ATCGAGGGTTCGAATCCCTTCCTCTCCGCCA
Downstream region at tRNA end position 
ttgtcgccgt
Secondary structure (Cloverleaf model)
>WENV170112133	Ser	GGA
                   t      GCCA ttgtcgccgt
                     A   C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATGCTCCAAAAGGGCATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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