The detailed information of tRNA gene sequence


Sequence ID>WENV170112158
Genome IDCEGD01004910
Search identical group
Phylum/Class[CEGD] microbial mat metagenome; grass silage
Species
Start position on genome 1254
End posion on genome 1344
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gaaaagatgc
tRNA gene sequence 
GGTGGGCTGGCAGAGTGGCTGAATGCAGCGGTCTTGAAAACCGCCGACGGTTAATAGCCG
TCCCGGGGTTCGAATCCCTGGCCCACCGCCA
Downstream region at tRNA end position 
ttttcttttc
Secondary structure (Cloverleaf model)
>WENV170112158	Ser	TGA
                   c      GCCA ttttcttttc
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     G T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       C G G G G     C
    G         | | |                 T T
    C       A T G C
      T G A        A     CGACGGTTAATAGCCGTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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