The detailed information of tRNA gene sequence


Sequence ID>WENV170112191
Genome IDCEGD01008754
Search identical group
Phylum/Class[CEGD] microbial mat metagenome; grass silage
Species
Start position on genome 2375
End posion on genome 2286
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
accagggcgc
tRNA gene sequence 
GGAGAGGTGCTAGAGTGGTTGAATAGGCTAGTCTCGAAAACTAGTGAGCTCGCAAGGGTT
CCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
gccttggccc
Secondary structure (Cloverleaf model)
>WENV170112191	Ser	CGA
                   c      GCCA gccttggccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G A T C       C A G G G     C
    G         | | |                 T T
    T       A T A G
      T G A        G     TGAGCTCGCAAGGGTTCC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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