The detailed information of tRNA gene sequence


Sequence ID>WENV170114598
Genome IDCENF01205653
Search identical group
Phylum/Class[CENF] marine metagenome genome assembly TARA_004_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 420
End posion on genome 330
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agttattcta
tRNA gene sequence 
GGAGGGATCGCATAGTCTGGCCTAGTGCGCAACATTCGAAATGTTGTGAGTCTTTTTGGC
TCCGTGGGTTCGAATCCCACTCCCTCCGCTA
Downstream region at tRNA end position 
aatataaact
Secondary structure (Cloverleaf model)
>WENV170114598	Ser	CGA
                   a      GCTA aatataaact
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
    C T G A        C      | | | | |     G
  T         T A C G       G T G G G     C
  G         + | | |                 T T
  G         G T G C
    C C T A        G     TGAGTCTTTTTGGCTCC
                    C - G
                    A - T
                    A - T
                    C - G
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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