The detailed information of tRNA gene sequence


Sequence ID>WENV170117009
Genome IDCENI01016338
Search identical group
Phylum/Class[CENI] marine metagenome genome assembly TARA_023_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 277
End posion on genome 186
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
atcatataca
tRNA gene sequence 
GGCAGGGTAGGTTAAGTGGTAAACCAGCGGGTTTATACTCCGTAGCAATAGATAATTGGC
TAATCTCGGTTCGAGTCCGGGTCCTGCTACCA
Downstream region at tRNA end position 
ttttttaata
Secondary structure (Cloverleaf model)
>WENV170117009	Ile	TAT
                   a      ACCA ttttttaata
                     G + T
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G + T          T G
                    T     G G G C C     A
      G A A        A      | + | | |     G
    T       T T G G       C T C G G     C
    G       | | | |                 T T
    G       A A C C
      T A          A     AGCAATAGATAATTGGCTAAT
                    G + T
                    C - G
                    G - C
                    G - C
                    G + T
                  T       C
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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