The detailed information of tRNA gene sequence


Sequence ID>WENV170117127
Genome IDCENI01045880
Search identical group
Phylum/Class[CENI] marine metagenome genome assembly TARA_023_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 190
End posion on genome 115
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
taaaggtgtt
tRNA gene sequence 
GGCTCAGTAGCTCAGTTGGTAGAGCAGTAGACTGAAAATCTATGTGTCGGTGGTTCAAAT
CCGCCCTGAGCCACCA
Downstream region at tRNA end position 
caaaatccca
Secondary structure (Cloverleaf model)
>WENV170117127	Phe	GAA
                   t      ACCA caaaatccca
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T
                     G - C          T A
                    T     C C G C C     A
      T G A        A      | | + | |     A
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    G + T
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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