The detailed information of tRNA gene sequence


Sequence ID>WENV170117240
Genome IDCENI01087950
Search identical group
Phylum/Class[CENI] marine metagenome genome assembly TARA_023_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1339
End posion on genome 1416
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaatacataa
tRNA gene sequence 
AGGGCTATAGCTCAATCAGGTTAGAGCGTCGCTCTCATAAAGCGAATGTTCTCGGTTCAA
GTCCGAGTGGCCCTACCA
Downstream region at tRNA end position 
tcttaaggaa
Secondary structure (Cloverleaf model)
>WENV170117240	Met	CAT
                   a      ACCA tcttaaggaa
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     A - T          T G
                    T     G A G C C     A
    C T A A        A      | | | | |     A
  A         C T C G       C T C G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     ATGTT
                    T - A
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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