The detailed information of tRNA gene sequence


Sequence ID>WENV170118666
Genome IDCENJ01081291
Search identical group
Phylum/Class[CENJ] marine metagenome genome assembly TARA_009_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 3874
End posion on genome 3803
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atacaatata
tRNA gene sequence 
GAGAGGATAGTTTAATGGTAAAACAACGGTTTTCAAAACCGTAGTTAGGGGTTCAAGTCC
CTTTCCTCTTGCtt
Downstream region at tRNA end position 
agagaaaatt
Secondary structure (Cloverleaf model)
>WENV170118666	SeC	TCA
                   a      GCtt agagaaaatt
                     G + T
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T          T G
                    T     T T C C C     A
        A A        A      | + | | |     A
      T     T T T G       A G G G G     C
      G     | | | |                 T T
      G     A A A C
        T A        A     AGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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