The detailed information of tRNA gene sequence


Sequence ID>WENV170120886
Genome IDCENL01015161
Search identical group
Phylum/Class[CENL] marine metagenome genome assembly TARA_025_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 166
End posion on genome 73
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atgtactgct
tRNA gene sequence 
GGAAGCGTGGGTGAGCCTGGTTTAAACCAAGTGGTTGCTAACTACTCGTGCGGAGAAATC
TGTACCATCCGTTCAAATCGGATCGCTTCCGCCA
Downstream region at tRNA end position 
ttagttgcct
Secondary structure (Cloverleaf model)
>WENV170120886	Ser	GCT
                   t      GCCA ttagttgcct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T A G G C     A
    C C G A        G      | | | | |     A
  T         G T G G       A T C C G     C
  G           | | |                 T T
  G         A A C C
    T T T A        A     CGTGCGGAGAAATCTGTACC
                    A - T
                    G - C
                    T - A
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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