The detailed information of tRNA gene sequence


Sequence ID>WENV170121055
Genome IDCENL01043456
Search identical group
Phylum/Class[CENL] marine metagenome genome assembly TARA_025_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 323
End posion on genome 399
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttacaaaatc
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCAGGGGACTCATAATCCCTTGGTCCCAGGTTCGAG
TCCTGGTGGGCCCACCA
Downstream region at tRNA end position 
tataaatcaa
Secondary structure (Cloverleaf model)
>WENV170121055	Met	CAT
                   c      ACCA tataaatcaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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