The detailed information of tRNA gene sequence


Sequence ID>WENV170121137
Genome IDCENL01053915
Search identical group
Phylum/Class[CENL] marine metagenome genome assembly TARA_025_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 15312
End posion on genome 15224
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acccagcacT
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGTTTAAGGCGCACGATTGGAATTCGTGTGGGGTGGCAACACCC
TCGGGGGTTCGAATCCCCCCCTCTCCGTtt
Downstream region at tRNA end position 
gaaaaagacc
Secondary structure (Cloverleaf model)
>WENV170121137	Ser	GGA
                   T      GTtt gaaaaagacc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G G G G G     C
    G         + | |                 T T
    T       A G G C
      T T A        G     TGGGGTGGCAACACCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       T
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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