The detailed information of tRNA gene sequence


Sequence ID>WENV170121146
Genome IDCENL01054026
Search identical group
Phylum/Class[CENL] marine metagenome genome assembly TARA_025_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 486135
End posion on genome 486221
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttaagtgatt
tRNA gene sequence 
GGAAGGTAGCCGGATACGGTTTGCCGGACCGCACTGCTAATGCGTGTGCCTGCCAGGGTG
TGTGGGTTCGAATCCCATGCCTTCCGCtt
Downstream region at tRNA end position 
tgtaatcaga
Secondary structure (Cloverleaf model)
>WENV170121146	Ser	GCT
                   t      GCtt tgtaatcaga
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T + G          T A
                    A     T A C C C     A
    C A T A        G      + | | | |     G
  G         G G C C       G T G G G     C
  G         | | | |                 T T
  T         C C G G
    T T G          A     GTGCCTGCCAGGGTGT
                    C   T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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