The detailed information of tRNA gene sequence


Sequence ID>WENV170121154
Genome IDCENL01054247
Search identical group
Phylum/Class[CENL] marine metagenome genome assembly TARA_025_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 180042
End posion on genome 180115
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ggatcactca
tRNA gene sequence 
GCCCCCGTAGCTCAGTTGGATAGAGCAATGCTTTCCTAAAGCATAGGTCGCAGGTTCGAA
CCCTGCCGGGGGTAtgt
Downstream region at tRNA end position 
tttctcagga
Secondary structure (Cloverleaf model)
>WENV170121154	Arg	CCT
                   a      Atgt tttctcagga
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          C A
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    A - T
                    T - A
                    G - C
                    C - G
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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