The detailed information of tRNA gene sequence


Sequence ID>WENV170121194
Genome IDCENL01058354
Search identical group
Phylum/Class[CENL] marine metagenome genome assembly TARA_025_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 147
End posion on genome 58
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgtgctagat
tRNA gene sequence 
GGAGGATTGGGTGAGAGGTTGAAACCAGCTGGTTGCTAACTAGCCGTAGGTGTAAAAACC
TACCAAGCGTTCGAATCGCTTATCCTCCGCac
Downstream region at tRNA end position 
agaaaatccc
Secondary structure (Cloverleaf model)
>WENV170121194	Ser	GCT
                   t      GCac agaaaatccc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T T C G C     A
      A G A        G      | | | | |     G
    G       G T G G       A A G C G     C
    G         | | |                 T T
    T       A A C C
      T G A        A     CGTAGGTGTAAAAACCTACC
                    G - C
                    C - G
                    T - A
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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