The detailed information of tRNA gene sequence


Sequence ID>WENV170121247
Genome IDCENL01082081
Search identical group
Phylum/Class[CENL] marine metagenome genome assembly TARA_025_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 428
End posion on genome 355
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atccatcttc
tRNA gene sequence 
GGGACTATAGCTCAATCGGTTAGAGCAGCGGACTCATAATCCGTTGGTTCTCGGTTCAAG
TCCGAGTAGTCCCAttc
Downstream region at tRNA end position 
ctaagttctt
Secondary structure (Cloverleaf model)
>WENV170121247	Met	CAT
                   c      Attc ctaagttctt
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     T - A
                     A - T          T G
                    T     G A G C C     A
      T A A        A      | | | | |     A
    C       C T C G       C T C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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