The detailed information of tRNA gene sequence


Sequence ID>WENV170121331
Genome IDCENL01112085
Search identical group
Phylum/Class[CENL] marine metagenome genome assembly TARA_025_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1087
End posion on genome 1162
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgccggaata
tRNA gene sequence 
GGGCCTGTAGTTCAGCGGTTAGAACGCACCGCTCATAACGGTGTTGTCGGGGGTTCGAAT
CCCTCCGGGCCCACCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170121331	Met	CAT
                   a      ACCA nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | + | | |     G
    G       C T T G       G G G G G     C
    G       | | | |                 T T
    T       G A A C
      T A          G     TTGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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