The detailed information of tRNA gene sequence


Sequence ID>WENV170131544
Genome IDCENS01078193
Search identical group
Phylum/Class[CENS] marine metagenome genome assembly TARA_022_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 270
End posion on genome 195
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggtaacttat
tRNA gene sequence 
TGCGCGGTAGAGCAGATGGTTAGCTCGCGAGTCTCATAAACTCGAGGTCGGAGGTTCGAA
TCCTCCCTGCGCACCAa
Downstream region at tRNA end position 
tacatcctaa
Secondary structure (Cloverleaf model)
>WENV170131544	Met	CAT
                   t      CCAa tacatcctaa
                     T - A
                     G - C
                     C - G
                     G - C
                     C - G
                     G + T
                     G - C          T A
                    T     C C T C C     A
      A G A        A      | | | | |     G
    T       C G A G       G G A G G     C
    G       | | | |                 T T
    G       G C T C
      T T A        G     AGGTC
                    C - G
                    G - C
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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