The detailed information of tRNA gene sequence


Sequence ID>WENV170136459
Genome IDCENV01037201
Search identical group
Phylum/Class[CENV] marine metagenome genome assembly TARA_031_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1080
End posion on genome 1004
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tatgagatat
tRNA gene sequence 
GGGGGATTAGCTCAATAGGTTAGAGCAACTGACTCATAATCAGTAGGTTCTAGGTTCAAG
TCCTAGATCCCCTACCA
Downstream region at tRNA end position 
actcgacctg
Secondary structure (Cloverleaf model)
>WENV170136459	Met	CAT
                   t      ACCA actcgacctg
                     G + T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A          T G
                    T     G A T C C     A
      T A A        A      | | | | |     A
    A       C T C G       C T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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