The detailed information of tRNA gene sequence


Sequence ID>WENV170136633
Genome IDCENV01056564
Search identical group
Phylum/Class[CENV] marine metagenome genome assembly TARA_031_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1168
End posion on genome 1242
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cacggcactt
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGTTAGAGCTGGGAACTCATAATTCCTAGGTCGCGGGTTCAAG
TCCTGCCAGCCCTACtt
Downstream region at tRNA end position 
tctattttat
Secondary structure (Cloverleaf model)
>WENV170136633	Met	CAT
                   t      ACtt tctattttat
                     G + T
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        T     AGGTC
                    G + T
                    G - C
                    G - C
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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