The detailed information of tRNA gene sequence


Sequence ID>WENV170148443
Genome IDCENZ01368462
Search identical group
Phylum/Class[CENZ] marine metagenome genome assembly TARA_025_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 977
End posion on genome 881
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tgtccgatat
tRNA gene sequence 
GGAGGCGTAACGTTGCCCGGTGGTGCGCCCGGTCTTCAAAACCGGTGAGGGACGTTAAGC
CGTTCCTGGTGGGTTCGACTCCCACACGCTTCCGCCA
Downstream region at tRNA end position 
atacctctca
Secondary structure (Cloverleaf model)
>WENV170148443	SeC(p)	TCA
                   t      GCCA atacctctca
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    A     C A C C C     A
      C C G        A      | | | | |     G
    C       T T G C       G T G G G     C
    G         + | |                 T T
    G       T G C G
      T G G        C     TGAGGGACGTTAAGCCGTTCCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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