The detailed information of tRNA gene sequence


Sequence ID>WENV170150113
Genome IDCEOC01085921
Search identical group
Phylum/Class[CEOC] marine metagenome genome assembly TARA_036_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 4375
End posion on genome 4301
Amino Acid Val
Anticodon AAC
Upstream region at tRNA start position 
ctgagccctt
tRNA gene sequence 
GCAGGCATAGTTTAATGGTAAGAACACAGTGTTAACACCGCTGAAATCTGAGTTCGATTC
TCAGTGCTTGTACGA
Downstream region at tRNA end position 
gagtgtggcg
Secondary structure (Cloverleaf model)
>WENV170150113	Val	AAC
                   t      ACGA gagtgtggcg
                     G + T
                     C - G
                     A - T
                     G + T
                     G - C
                     C - G
                     A - T          T T
                    T     G A C T C     A
      T A A        A      | | | | |     G
    G       T T T G       C T G A G     C
    G       + | | |                 T T
    T       G A A C
      A A          A     AAAT
                    C - G
                    A - T
                    G - C
                    T + G
                    G - C
                  T       C
                  T       A
                    A A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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