The detailed information of tRNA gene sequence


Sequence ID>WENV170150261
Genome IDCEOC01101507
Search identical group
Phylum/Class[CEOC] marine metagenome genome assembly TARA_036_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 19
End posion on genome 108
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tccgctcaat
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTTAAGGCACATGCCTGGAAAGCGTGCGTACCCTAACAGGTA
TCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tgtccctcaa
Secondary structure (Cloverleaf model)
>WENV170150261	Ser	GGA
                   t      GCCA tgtccctcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         + | |                 T T
    T       A G G C
      T T A        A     CGTACCCTAACAGGTATC
                    C - G
                    A - T
                    T + G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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