The detailed information of tRNA gene sequence


Sequence ID>WENV170151135
Genome IDCEOC01223581
Search identical group
Phylum/Class[CEOC] marine metagenome genome assembly TARA_036_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 4
End posion on genome 81
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnnnnntgt
tRNA gene sequence 
CGGGGCGTGGCTCAGCTTGGCTAGAGTGCCTGCCTTGGGAGCAGGAGGTCGCTGGTTCAA
ATCCAGTCGCCCCGACCA
Downstream region at tRNA end position 
tttaactcaa
Secondary structure (Cloverleaf model)
>WENV170151135	Pro	TGG
                   t      ACCA tttaactcaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G A C C     A
    T C G A        G      + | | | |     A
  T         C T C G       G C T G G     C
  G         | | | +                 T T
  G         G A G T
    C T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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