The detailed information of tRNA gene sequence


Sequence ID>WENV170152316
Genome IDCEOE01086149
Search identical group
Phylum/Class[CEOE] marine metagenome genome assembly TARA_025_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 127
End posion on genome 213
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgagcacctT
tRNA gene sequence 
GGAAAAGTGGCCGAGTGGTTTAAGGCGTTAGTCTTGAAAACTAAAGTAGTGAAAGCTACC
GTGAGTTCGAATCTCACCTTTTCCGTtt
Downstream region at tRNA end position 
acaaacccta
Secondary structure (Cloverleaf model)
>WENV170152316	Ser	TGA
                   T      GTtt acaaacccta
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     A - T
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     AGTAGTGAAAGCTACC
                    T - A
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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