The detailed information of tRNA gene sequence


Sequence ID>WENV170154181
Genome IDCEOF01178576
Search identical group
Phylum/Class[CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 297
End posion on genome 373
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgaccattat
tRNA gene sequence 
GGCGTGATAGCTCAGTTGGTTAGAGCGCAGGATTCATAACCCTGAGGTCGGCAGTTCAAA
TCTGCCTCACGCTACTA
Downstream region at tRNA end position 
aataacaaaa
Secondary structure (Cloverleaf model)
>WENV170154181	Met	CAT
                   t      ACTA aataacaaaa
                     G + T
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C
                     A - T          T A
                    T     C C G T C     A
      T G A        A      | | | | |     A
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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