The detailed information of tRNA gene sequence


Sequence ID>WENV170154653
Genome IDCEOF01212518
Search identical group
Phylum/Class[CEOF] marine metagenome genome assembly TARA_018_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 227
End posion on genome 318
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cttaccttta
tRNA gene sequence 
GGAGAGATGGGTGAGTGGTTTAAACCAGTGGTTTGCTAAACCGCCGTACGGGTAATACCG
TACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tttttttagt
Secondary structure (Cloverleaf model)
>WENV170154653	Ser	GCT
                   a      GCCA tttttttagt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    T       A A C C
      T T A        A     CGTACGGGTAATACCGTACC
                    G - C
                    T + G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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