The detailed information of tRNA gene sequence


Sequence ID>WENV170155217
Genome IDCEOG01003198
Search identical group
Phylum/Class[CEOG] marine metagenome genome assembly TARA_034_SRF_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 723
End posion on genome 628
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
GGCGACGATTGAGTAGCTGGTGCTCTCCTCGGTCTTCAACACCGTAGTGTAGTAGTTGAT
ATTACAGGTAGGTTCGATTCCTATCCGTCGCCGCTA
Downstream region at tRNA end position 
acataatgaa
Secondary structure (Cloverleaf model)
>WENV170155217	SeC	TCA
                   t      GCTA acataatgaa
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C
                     A   C          T T
                    T     T A T C C     A
      C G A        T      + | | | |     G
    T       T G A G       G T A G G     C
    G         | | |                 T T
    G       T C T C
      T G C        C     AGTGTAGTAGTTGATATTACAG
                    T   T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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