The detailed information of tRNA gene sequence


Sequence ID>WENV170155838
Genome IDCEOH01004336
Search identical group
Phylum/Class[CEOH] marine metagenome genome assembly TARA_034_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 106
End posion on genome 179
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gaggccccag
tRNA gene sequence 
GCGCCTGTAACTCAATTGGATAGAGTAGCGGCCTTCTAAGCCGCAAGTTGCAGGTTCGAG
TCCTGCCAGGCGTGttt
Downstream region at tRNA end position 
gttatgattg
Secondary structure (Cloverleaf model)
>WENV170155838	Arg	TCT
                   g      Gttt gttatgattg
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | | | |     G
    T       C T C A       G C A G G     C
    G       | | | |                 T T
    G       G A G T
      A T A        A     AAGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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