The detailed information of tRNA gene sequence


Sequence ID>WENV170157329
Genome IDCEOJ01052834
Search identical group
Phylum/Class[CEOJ] marine metagenome genome assembly TARA_034_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 272
End posion on genome 187
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttaaaaaag
tRNA gene sequence 
GTAAGCGTGGCTGAGTGGTTTATAGCACTGATTTGCTAAATCAGAAAATTTATATAATTT
CACAAGTTCAAATCTTGTCGTTTACGttt
Downstream region at tRNA end position 
tttttaattt
Secondary structure (Cloverleaf model)
>WENV170157329	Ser	GCT
                   g      Gttt tttttaattt
                     G - C
                     T - A
                     A - T
                     A - T
                     G + T
                     C - G
                     G - C          T A
                    T     T G T T C     A
      T G A        G      | | | | |     A
    G       G T C G       A C A A G     C
    G       + | | |                 T T
    T       T A G C
      T T A        A     AAAATTTATATAATTTC
                    C - G
                    T - A
                    G - C
                    A - T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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