The detailed information of tRNA gene sequence


Sequence ID>WENV170158144
Genome IDCEOJ01119601
Search identical group
Phylum/Class[CEOJ] marine metagenome genome assembly TARA_034_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 293
End posion on genome 205
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aacaacaaca
tRNA gene sequence 
GGAGAGTGGGCAGGACGGTAATGCAGCGGATTGCTAATCCGTACAGCCTGTTAAAGGCTG
AGTGGGTTCGACTCCCACACTCTCCGCCA
Downstream region at tRNA end position 
gagggaagat
Secondary structure (Cloverleaf model)
>WENV170158144	Ser	GCT
                   a      GCCA gagggaagat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T C
                    G     C A C C C     A
        A G        G      | | | | |     G
      C     G A C G       G T G G G     C
      G       | | |                 T T
      G     A T G C
        T A        A     ACAGCCTGTTAAAGGCTGA
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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