The detailed information of tRNA gene sequence


Sequence ID>WENV170158273
Genome IDCEOJ01169667
Search identical group
Phylum/Class[CEOJ] marine metagenome genome assembly TARA_034_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 80
End posion on genome 156
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aattcttcat
tRNA gene sequence 
GGCGACGTAGCCAAGTGGTCTAAGGCCGAGGTCTGCAAAACCTCTATTCGGCGGTTCGAA
TCCGCCCGTCGCCTCCA
Downstream region at tRNA end position 
ttgtatggcc
Secondary structure (Cloverleaf model)
>WENV170158273	Cys	GCA
                   t      TCCA ttgtatggcc
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C C G C C     A
      T G A        A      | | | | |     G
    G       A C C G       G G C G G     C
    G         | | |                 T T
    T       A G G C
      C T A        C     TATTC
                    G - C
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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