The detailed information of tRNA gene sequence


Sequence ID>WENV170159696
Genome IDCEOK01083346
Search identical group
Phylum/Class[CEOK] marine metagenome genome assembly TARA_030_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 208
End posion on genome 135
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatataaaca
tRNA gene sequence 
AGCGATGTGGCGCAGTGGTTAGCGTGTCTGGCTCATAACCAGAAGGTCGGTGGTTCGAAT
CCACTCATCGCTACtt
Downstream region at tRNA end position 
gtccaaaagg
Secondary structure (Cloverleaf model)
>WENV170159696	Met	CAT
                   a      ACtt gtccaaaagg
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T C A C C     A
      T G A        G      + | | | |     G
    G       C G C G       G G T G G     C
    G       | | | +                 T T
    T       G C G T
      T A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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