The detailed information of tRNA gene sequence


Sequence ID>WENV170160519
Genome IDCEOK01153945
Search identical group
Phylum/Class[CEOK] marine metagenome genome assembly TARA_030_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 558
End posion on genome 631
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
catccctaat
tRNA gene sequence 
GGCACCGTGGCCGAGTGGCTAGGCAGAGCTCTGCAAAAGCTTGTACAGCGGTTCGAATCC
GCTCGGTGCCTCTA
Downstream region at tRNA end position 
ctttagtcgc
Secondary structure (Cloverleaf model)
>WENV170160519	Cys	GCA
                   t      TCTA ctttagtcgc
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     T C G C C     A
        G A        G      | | | | |     G
      T     G C C G       A G C G G     C
      G       | | |                 T T
      G     A G G C
        C T        A     GTAC
                    G + T
                    A - T
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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