The detailed information of tRNA gene sequence


Sequence ID>WENV170160539
Genome IDCEOK01156375
Search identical group
Phylum/Class[CEOK] marine metagenome genome assembly TARA_030_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 39
End posion on genome 112
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atacaataca
tRNA gene sequence 
AGTAGCGTAGTCTCAGTTGGAAGAGCGTTGGGCTCATGTCCCGAAGGTCGGAGGTTCGAT
CCCTCCCGCTACTAtta
Downstream region at tRNA end position 
tattaggtat
Secondary structure (Cloverleaf model)
>WENV170160539	Met	CAT
                   a      Atta tattaggtat
                     A - T
                     G - C
                     T - A
                     A - T
                     G - C
                     C - G
                     G - C          C T
                    T     C C T C C     A
      G A C        A      | | | | |     G
    T       T C T G       G G A G G     C
    T       +   + |                 T T
    G       G A G C
      G A A        G     AGGTC
                    T - A
                    T + G
                    G - C
                    G - C
                    G - C
                  C       T
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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